Pathomx: Example Analysis

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Short demo of an experimental analysis of metabolomic (NMR) data using Pathomx. Metabolomic test dataset produced from THP-1 cells grown under normal and hypoxic conditions. Spectra (2D 1H JRES) have been pre-processed and quantified using the BML-NMR service.

The video shows an example analysis from processed data through to metabolic pathways and PLS-DA outputs.

Pathomx is an open-source workflow-based scientific analysis application. Source code is available here with packaged binaries and paper to follow shortly. More information is available on this site.